The SOL Genomics Network (SGN) is a Clade Oriented Database (COD) containing
genomic, genetic, phenotypic and taxonomic information for plant genomes. SGN
originally concentrated on the Euasterid clade, including the families Solanaceae
(e.g. tomato, potato, eggplant, pepper and petunia) and Rubiaceae
(coffee), but since our tools are not specific to
these genomes, we are expanding our scope. If you are interested in using SGN
to explore one of the many new plant genomes being sequenced, please contact
Genomic information is presented in a comparative format and tied to other
important plant model species such as Arabidopsis. SGN is also one of the
bioinformatics centers involved in tomato genome sequencing.
SGN is a community curated database. This means that you can contribute annotations to genes and phenotypes by becoming a locus editor. You can also upload, analyze and share your map and QTL data. Contributions by members of the community like you help keep the information in the database up to date and correct.
The 150 tomato genome consortium announces the availability of the structural variation browser for tomato and its wild relatives at: http://www.tomatogenome.net/VariantBrowser. Raw data will be made available soon via this site as well. Accept the data access agreement before usage of this data. [Oct 16, 2013]